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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888425.1_cds_XP_016443000.1_38205
CDS Infomation

[gene=LOC107768390] [db_xref=GeneID:107768390] [protein=RHOMBOID-like protein 9, chloroplastic] [protein_id=XP_016443000.1] [location=complement(join(19295..19535,19621..19766,19937..20107,20543..20708,20812..20992,21085..21430))] [gbkey=CDS]
Sequence

ATGGTGTTGACTACAGTATTATTGGGAAGAGTTCATAGCAGGGGATGCATTCCACAGCTA
GTTTTGCCTAAAATAAGTCATGTATATAAAGAGAAAAAAAGAATGCACCTCTTTGTATCC
CGGCTTTCACATAGCACTCAGAGAAGAATATTTTGGACAGTGAAATCTGCACTGAACAAT
CAGGAGAAGCAACTGAGAGCCTTAGATTCTTACTTCCAAAAGCTCAATAATAGAACAGGA
GCTTCCTCTTCGAATGAGATAGAAGAAATAACTGGCAAAAATCATCAACTTAAAGCAGAG
AAATCACTGAAATCTTTAAATGATTTTAGTGGAAAAGCCAATGGAGGTGCAGAGTCAAAA
TTGCATGCTTTTTCGTCTTCTGATGACGAAACATTTGAAGAAGCATCATATTTTTCCATG
AAAATGATCAACAGTGGTGGCAGGGCTAAGAAACTAAAACAGTACTTGAAGTTAAAAGCT
AAGGACATTGGCAGTTCAAACCAAGAATCATCTAGTTTTTACTTGATAGGAATACTGGCT
TCTCTAAACATTGCAGTTTTCCTCTTCGAGACAGCTAGTCCAGTCAGGAACTCTGAAATA
GGGATGCTTTCACTTCCAATGGTATATGGAGCAAAGATAAATCATTTGATCCTACTTGGC
GAATGGTGGAGACTTCTGACACCAATGTTTCTGCACTCAGGAGTCCTTCACATAGCCCTT
GGTTGTTGGGTGCTTCTTAGTTTTGGGCCTCAAGTATGCAAAGCATATGGTTCATTTGCA
TTTTTCCTGATATATATTCTTGGAGGTATTTCTGGTAACCTAATCAGCTTTCTTCACACC
CCAGAGCCAACTGTTGGAGGAACTGGACCTGGTTTTGCTTTAATAGGAGCTTGGCTCATT
TATCAAGTTCGGAACAAAGACATGATAGGAAAAGAAGGCATGATTGAGAAGGCGATGATG
GTCACTGCTTTCAGCTTTGTGCTTAGCAACTTTGGGCCTATAGATAACTGGGCACATTTT
GGAGCAGCTTTAATGGGAATAGCATATGGTTATCTTACATGTCCAACTCTTCAACTTGAC
AATGCAGCTTCAGAAAGTGGACAAAAAGAAGGAATCACATTGTTTAAACAATATTCAGAT
CCTTGTAAATCTCTTCTTTGCTTCTCAGTCTTCATTCTGCTGCTGGCTTCCTTGCTTTTG
GTAATAGAACCTCCTCTCAACTCAATAGCTGAAGCTGCAGACAGGTTCTAA

Peptide Sequence

PEP ID

XP_016443000.1
PEP Infomation

PREDICTED: RHOMBOID-like protein 9, chloroplastic [Nicotiana tabacum]
Sequence

MVLTTVLLGRVHSRGCIPQLVLPKISHVYKEKKRMHLFVSRLSHSTQRRIFWTVKSALNN
QEKQLRALDSYFQKLNNRTGASSSNEIEEITGKNHQLKAEKSLKSLNDFSGKANGGAESK
LHAFSSSDDETFEEASYFSMKMINSGGRAKKLKQYLKLKAKDIGSSNQESSSFYLIGILA
SLNIAVFLFETASPVRNSEIGMLSLPMVYGAKINHLILLGEWWRLLTPMFLHSGVLHIAL
GCWVLLSFGPQVCKAYGSFAFFLIYILGGISGNLISFLHTPEPTVGGTGPGFALIGAWLI
YQVRNKDMIGKEGMIEKAMMVTAFSFVLSNFGPIDNWAHFGAALMGIAYGYLTCPTLQLD
NAASESGQKEGITLFKQYSDPCKSLLCFSVFILLLASLLLVIEPPLNSIAEAADRF

Transcript Sequence

Gene sequence data has not been registered.